<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="3.10.0">Jekyll</generator><link href="https://achi0899.github.io/achinoam-lab-book/feed.xml" rel="self" type="application/atom+xml" /><link href="https://achi0899.github.io/achinoam-lab-book/" rel="alternate" type="text/html" /><updated>2026-05-19T18:24:47+00:00</updated><id>https://achi0899.github.io/achinoam-lab-book/feed.xml</id><title type="html">achinoam-lab-book</title><subtitle>master student</subtitle><entry><title type="html">My Protocol Homework</title><link href="https://achi0899.github.io/achinoam-lab-book/my-protocol-homework/" rel="alternate" type="text/html" title="My Protocol Homework" /><published>2026-05-19T00:00:00+00:00</published><updated>2026-05-19T00:00:00+00:00</updated><id>https://achi0899.github.io/achinoam-lab-book/my-protocol-homework</id><content type="html" xml:base="https://achi0899.github.io/achinoam-lab-book/my-protocol-homework/"><![CDATA[<p>####19/05/2026</p>

<p>##homework peotocol</p>

<p>#<strong><em><u>my protocol- extraction of fatty acid in GC</u></em></strong></p>

<p>##step 1:</p>

<p>weighte 50ul fish tissue</p>

<p>##step 2:</p>

<p>make 1M sodium methylate+MeOH (use the big 5ml pipetorand the 250 spescial red or blue pipetor), for 4ml- 0.155ml sodium (in the fridge), 3.85ml methanolput it in a glass tube and add 1ml to each sample</p>

<p>##step 3:</p>

<p>boil for 30 minutes, vortex every 10 minutes</p>

<p>##step 4:</p>

<p>add 100 ul internal standart FAME, for 10 ml stock- 1000 ug/ml + actiton</p>

<p>##step 5:</p>

<p>PH control-add 1-2 drops of phenolphthalein (in the frieg), 
            add slowly 500 ul 1M HCL (for 20000ul- 16000ul 1.25 HCL, 4000ul methanol) use normal pipetor</p>

<p>##step 6:          <br />
vortex, and boil for 5 minutes</p>

<p>##step 7:</p>

<p>add 2ml NaCL (in the fridge), vortex
   (for 50 ml-0.35g/ml)</p>

<p>##step 8:</p>

<p>add 0.5ml MTBE (in the fridge)use the blue secial pipetor, invert</p>

<p>##step 9:</p>

<p>centrifuge for 5 minutes, 3000rpm</p>

<p>##step 10:</p>

<p>put the samples in small narrow tubes, and take the upper layer in GC vial</p>

<p>##step 11:</p>

<p>put in the GC-MS and start the progrem</p>

<p><img src="images/fame_standart.jpg" alt="fame standart" /></p>

<p>##Figure 1: inpute of the fatty acid in the GC-MS
| Fish ID | Season | Temperature (C) | Length (cm) | Weight (g) | FA % |
|—|—|—|—|—|—|
| 1 | Winter | 18 | 12.4 | 35 | 22 |
| 2 | Winter | 17 | 13.1 | 38 | 25 |
| 3 | Summer | 28 | 11.8 | 30 | 18 |
| 4 | Summer | 29 | 12.0 | 31 | 17 |
| 5 | Winter | 16 | 13.5 | 40 | 26 |
| 6 | Summer | 30 | 11.5 | 29 | 16 |</p>

<p>##scientific references##</p>

<p><a href="&quot;C:\Users\achi0\Downloads\Optimised_preparation_of_fish_tissue_samples_for_t.pdf&quot;">Optimised preparation of fish tissue samples for fatty acid extraction</a></p>

<p>##online protocol of analysis of fatty acid composition by gas chromatography</p>

<p><a href="https://bio-protocol.org/exchange/minidetail?id=5272656&amp;type=30&amp;utm_source=chatgpt.com">Analysis of fatty acid composition by gas chromatography(GC)</a></p>]]></content><author><name></name></author><summary type="html"><![CDATA[####19/05/2026 ##homework peotocol]]></summary></entry><entry><title type="html">My Protocol</title><link href="https://achi0899.github.io/achinoam-lab-book/my-protocol/" rel="alternate" type="text/html" title="My Protocol" /><published>2026-05-19T00:00:00+00:00</published><updated>2026-05-19T00:00:00+00:00</updated><id>https://achi0899.github.io/achinoam-lab-book/my-protocol</id><content type="html" xml:base="https://achi0899.github.io/achinoam-lab-book/my-protocol/"><![CDATA[<p>####19/05/2026</p>

<p>##homework peotocol</p>

<p>#<strong><em><u>my protocol- extraction of fatty acid in GC</u></em></strong></p>

<p>##step 1:</p>

<p>weighte 50ul fish tissue</p>

<p>##step 2:</p>

<p>make 1M sodium methylate+MeOH (use the big 5ml pipetorand the 250 spescial red or blue pipetor), for 4ml- 0.155ml sodium (in the fridge), 3.85ml methanolput it in a glass tube and add 1ml to each sample</p>

<p>##step 3:</p>

<p>boil for 30 minutes, vortex every 10 minutes</p>

<p>##step 4:</p>

<p>add 100 ul internal standart FAME, for 10 ml stock- 1000 ug/ml + actiton</p>

<p>##step 5:</p>

<p>PH control-add 1-2 drops of phenolphthalein (in the frieg), 
            add slowly 500 ul 1M HCL (for 20000ul- 16000ul 1.25 HCL, 4000ul methanol) use normal pipetor</p>

<p>##step 6:          <br />
vortex, and boil for 5 minutes</p>

<p>##step 7:</p>

<p>add 2ml NaCL (in the fridge), vortex
   (for 50 ml-0.35g/ml)</p>

<p>##step 8:</p>

<p>add 0.5ml MTBE (in the fridge)use the blue secial pipetor, invert</p>

<p>##step 9:</p>

<p>centrifuge for 5 minutes, 3000rpm</p>

<p>##step 10:</p>

<p>put the samples in small narrow tubes, and take the upper layer in GC vial</p>

<p>##step 11:</p>

<p>put in the GC-MS and start the progrem</p>

<p><img src="images/fame_standart.jpg" alt="fame standart" /></p>

<p>##Figure 1: inpute of the fatty acid in the GC-MS
| Fish ID | Season | Temperature (C) | Length (cm) | Weight (g) | FA % |
|—|—|—|—|—|—|
| 1 | Winter | 18 | 12.4 | 35 | 22 |
| 2 | Winter | 17 | 13.1 | 38 | 25 |
| 3 | Summer | 28 | 11.8 | 30 | 18 |
| 4 | Summer | 29 | 12.0 | 31 | 17 |
| 5 | Winter | 16 | 13.5 | 40 | 26 |
| 6 | Summer | 30 | 11.5 | 29 | 16 |</p>

<p>##scientific references##</p>

<p><a href="&quot;C:\Users\achi0\Downloads\Optimised_preparation_of_fish_tissue_samples_for_t.pdf&quot;">Optimised preparation of fish tissue samples for fatty acid extraction</a></p>

<p>##online protocol of analysis of fatty acid composition by gas chromatography</p>

<p><a href="https://bio-protocol.org/exchange/minidetail?id=5272656&amp;type=30&amp;utm_source=chatgpt.com">Analysis of fatty acid composition by gas chromatography(GC)</a></p>]]></content><author><name></name></author><summary type="html"><![CDATA[####19/05/2026 ##homework peotocol]]></summary></entry></feed>